Instrument control, image processing and analysis software.

Combine the Aurox Visionary instrument control software with one or more of a range of third party image processing and analysis software for optimum performance.

aurox confocal microscope visionary software image

The following software are available for order from Aurox, either as stand-alone units or as part of a Clarity microscopy system:

The Aurox Visionary software has been specially developed for the acquisition of live cell imaging data using the Aurox Clarity LFC unit as part of a laser free confocal microscopy system.

Designed with simplicity and ease of use at its core, the software provides a single graphical user interface, which relates device and experimental settings directly to the connected instrument hardware.

The Visionary software provides for the optimisation and control of the instrument set-up and calibration followed by the set-up and image acquisition control of the confocal microscopy experiment.

Key features of the software:

  • Instrument set-up and calibration
  • Experiment set-up and control
  • Real time confocal image quality inspection tool
  • Supports a range of digital camera manufacturer sCMOS devices, including, PCO and Andor
  • Outputs data in OME Tiff format

aurox confocal microscope Aurox Visionary

IMARIS is an easy to use 3D/4D image analysis software which seamlessly reconstructs and renders large 3D/4D datasets. At your disposal is a fully integrated platform to organize, visualise, analyse, and explore your images and present them in the best possible manner.

The big data capable Imaris Stitcher easily aligns and stitches image tiles and is able to export stitched images of terabytes in size.

Imaris ClearView-GPU™ deconvolution has been engineered to ensure the highest speeds and functionality with the largest possible datasets. Imaris ClearView-GPU™ deconvolution increases the resolution in all three dimensions: features that were previously indistinguishable become clearly separated.

aurox confocal microscope Oxford Instruments IMARIS

A third party software package, Fiji is a distribution of the widely used open source image processing software, ImageJ.

Fiji comes complete with a wide range of plugins used for the scientific analysis of multi-dimensional image data resulting from the life sciences.

Techniques supported:

  • Image processing
  • Colocalisation
  • Deconvolution
  • Registration
  • Segmentation
  • Tracking
  • Visualisation

Fiji is actively maintained, with regular update releases.

aurox confocal microscope Fiji / ImageJ

Image-Pro Premier 3D is a commercial 3D image analysis software package from Media Cybernetics.

Designed for research professionals who need to view and measure structures in a range of spatial or temporal image dimensions, Image-Pro Premier 3D provides all the essential 3D analysis tools in one software package.

Key features include:

  • Automatically measure and count objects
  • Identify what to measure
  • Guided segmentation for measurement of complex 3D objects
  • Manual 3D measurements
  • 3D/4D Data Management
  • Automatically collect and analyse data from multiple experiments
  • 3D/4D high resolution image visualisation
  • 3D Clipping planes
  • 3D processing and dataset correction
  • Key frame animation movie publication

aurox confocal microscope Media Cybernetics Image-Pro Premier 3D

Aivia represents the future of Microscopy Image Analysis. Powered by over 20 years of in-house R&D, Aivia is the most innovative and complete 2-to-5D image visualization, analysis and interpretation platform today.

Using state-of-the-art algorithm and software architecture, Aivia delivers top performance on critical tasks such as display of super-large images and analysis of complex biological phenomena.

Applications include:

  • Cell analysis
  • Relationship exploration
  • Object tracking
  • Neuron reconstruction
  • Colocalization
  • Object and pixel classification
  • Train and apply your own machine and deep learning models
Aivia is powered by a range of machine and deep learning technologies for image restoration, super resolution, segmentation, object classification and novelty detection.

Aivia is deployed as AiviaWeb (leveraging cloud computing and accessible via any browser) and/or as a desktop application. With Aivia, you are the analysis expert.

aurox confocal microscope DRVision Aivia

The Huygens Software includes many image processing options for brightfield and all types of fluorescence Microscope images. With Huygens it is possible to perform image deconvolution and restoration interactive analysis and volume visualization in 2D-4D multi-channel and time.

Additional Server and GPU-based Options ensure maximisation of hardware performance.

The Huygens software comes in different flavors offering solutions for both single users and multi-user facilities.

Huygens is also available as a web-based interface allowing submission of deconvolution tasks via your internet browser to the compute engine Huygens Core.

aurox confocal microscope SVI Huygens

Microvolution software delivers nearly instantaneous deconvolution by combining intelligent software programming with the power of a GPU developed by Stanford scientists.

The software deconvolves images from widefield confocal two photon light sheet and HCA microscopes.

Blind deconvolution option improves noisy data such as deep tissue imaging. Multi-GPU options enable even giant images to be processed in seconds.

Micovolution allows you to:

  • Work more effectively in dim light and realize greater success rates with live-cell and time-lapse experiments;
  • Create cleaner measurements after deconvolution (e.g. colocalization FRET data neurite lengths fluorescence intensities);
  • Make adjustments to your microscopy experiments on the fly and collect more data from the same sample;

aurox confocal microscope MicroVolution